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ABOUT THIS RECORD

ID: MNEST004398
species: Oryza sativa
miRNA family: MIR1884
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATGACGCCGTTGACTTTTTG

miRNA*
 AAAAATCAACGGTGTCATACA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 TACTCCCCCTATATTTTAATGTATGACGCCGTTGACTTTTTGACCAACGTTTGACCATTCGTTTTATTCAAATTTTTTGTGCAAATATTAAAATATTTAT
GTCATGCTTAAAGAACATTTGATGACGAATCAAGTCACAATAAAATAAATAATAATTACATAAATGTTTGGAATAAGACGAATGGTTAAACGTTGGATAA
AAAATCAACGGTGTCATACATTAAAATATGAAATATGA

dot-bracket secondary structure
.........((((((((((((((((((((((((((.((((((.((((((((((((((((((((((((((.(((.(((.....))).))).((((((((((
((.((.............(((.((((.......)))))))..............)).)))))))))))).)))))))))))))))))))))))))).)))
))).))))))))))))))))))))))))))........


SIMILARITIES
miRBase osa-MIR1884a: 0.00000000000001

PMRD osa-miR1884a: 0.00000000000001

microPC miR1884: 1e-36		UniProt no hits

RFAM MIR806: 6e-85		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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