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ABOUT THIS RECORD

ID: MNEST004401
species: Oryza sativa
miRNA family: MIR2123
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAAAAGTCAACGATGTCAAA

miRNA*
 TGACGCCGTTGACTTTTTTCA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 ACTACCTTCATTCTAAAATGTTTGACGCCGTTGACTTTTTTCAAAAATATTTGATCGTTCGTCTTATTTAAAAAATTTAAGTAATTGTTAATTTTTTTTC
TATCATTTGATTTATTGTTAAATATACTTTTATGTATACATATAGTTTTACACATATCACAAAAGTTTTTGAATAAAACGAACAAACATGTTTAAAAAAG
TCAACGATGTCAAACATTTAGGGAATGAGGAAA

dot-bracket secondary structure
.....(((((((((.((((((((((((.(((((((((((((.((..((.(((....((((((.(((((((((((.((((((((....(((((........
.(((....))).....)))))...))))).(((((.((..........)).))))).....))).))))))))))).))))))))).)).)).)))))))
)))))).))))))))))))..)))))))))...


SIMILARITIES
miRBase osa-MIR806h: 5e-39

PMRD oru-miR806: 8e-47

microPC miR806: 1e-24		UniProt no hits

RFAM MIR806: 8e-106		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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