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ABOUT THIS RECORD

ID: MNEST004471
species: Oryza sativa
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAGGAATGGCTTGCCTA

miRNA*
 GTGAGCCTTCATGGCTAAG

mismatches: 2
bulges: 1
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pre-miRNA
 TTAAGCAGAGTAAACTTGTGAGGAGGGTAGCCTTACATGGAGATGAGGAGATTGCCTCTGTTAGCCAGGAATGGCTTGCCTATCTCCACTATTTGGTTCA
TCACTGGAACACACTTGGGGTTCTCAGATGGTGGATGAAATATGGAAGATGGTGAGCCTTCATGGCTAAGAGAGTGATTCTCATCCCCCATGCTAGGCTG
TATCCCTCTTTCTAGCTCTCAACATCTC

dot-bracket secondary structure
.......(((.....(((.((((((((((((((..(((((.((((((((......((((.(((((((.(((.((((((((.(((((((.(((((.(((((
((((((((((.........)))).))).)))))))).)))))))).))))))))))))))).))))))).))))...))))))))..)))))..))))))
...)))))))).)))..)))........


SIMILARITIES
miRBase osa-MIR1430: 7e-72

PMRD osa-miR1430: 7e-72

microPC miR1430: 8e-53		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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