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ABOUT THIS RECORD
ID:
MNEST004547
species:
Oryza sativa
miRNA family:
MIRf381
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTTGCGGCCCGTCACAGATG
miRNA*
TCTGTGACGGGCACCAACTCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
CCATATCTCAAACAGGCCTAA
AGTTGCGGCCCGTCACAGATG
ACCATCA
TCTGTGACGGGCACCAACTCT
AGGCCCGATTGAGATAAC
dot-bracket secondary structure
...((((((((...((((((.
(((((..((((((((((((((
(...)))
))))))))))))..))))).)
)))))...))))))))..
SIMILARITIES
miRBase
osa-MIR817
:
0.0000000000003
PMRD
osa-miRf10957-akr
:
2e-17
microPC
miR817
:
0.00000007
UniProt
no hits
RFAM
MIR821: 0.00007
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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