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ABOUT THIS RECORD

ID: MNEST004565
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACATTGTGAAACGGGGGGA

miRNA*
 CCTCCGTTTCACAATGTAAGT

mismatches: 0
bulges: 0
View larger
pre-miRNA
 CAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCATAGCCATTTCCCATATTTATAATGATGTTAATGAATCTATCATAGATATATATGTCCTAGATT
TATTNAACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATAT

dot-bracket secondary structure
....(((((((((((((((((((((((((((((((..((((.((((((.(((((((((.(((((((.(((((((((.((((......))))...))))))
)))..))))))).))))))))).))))))))))..)))))))))))))))))))))))))))))))...


SIMILARITIES
miRBase osa-MIR446: 8e-40

PMRD osa-miR446: 8e-40

microPC miR446: 7e-31		UniProt no hits

RFAM MIR1122: 6e-35		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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