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ABOUT THIS RECORD
ID:
MNEST004586
species:
Oryza sativa
miRNA family:
MIR441
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCATCAATATAAATGTGGA
miRNA*
CATATTCATATTGATGCTAAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
CTACTCCCTCCGTTTTACAATGTAAGTCATCTAGCATTTCT
CATATTCATATTGATGCTAAT
AAATCTAAACATATATACTTATTTAGATTCAT
TAGCAT
CAATATAAATGTGGA
AAATGTTAGAATGACTTACATTGTGAAACGGATGATTA
dot-bracket secondary structure
........(((((((((((((((((((((((((((((((.(
((((((.((((((((((((((
.((((((((............)))))))).))
))))))
)))))).))))))).
))))))))).))))))))))))))))))))))......
SIMILARITIES
miRBase
osa-MIR809g
:
2e-43
PMRD
osa-miR809g
:
2e-43
microPC
miR809
:
1e-19
UniProt
no hits
RFAM
MIR1122: 9e-46
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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