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ABOUT THIS RECORD

ID: MNEST004607
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACATTGTGAAACGGAGGAA

miRNA*
 CCTCCGTTTTGCTGGTGAAGT

mismatches: 0
bulges: 2
View larger
pre-miRNA
 TGTTTTATTTCCTCCGTTTTGCTGGTGAAGTCATTCTGATATTTTCCACATTCATATGTATGTTTATGAATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATGTAGATTCATTTACATCATTATGAATGTGAGAAATGCTACAATGACTTACATTGTGAAACGGAGG
AAGTAGCAA

dot-bracket secondary structure
(((..(((((((((((((((((.((((((((((((.((.((((((.((((((((((...((((..((((((.((((((((((((((((((((((((((((
(((....))))))))))))))))))))))))))))))).))))))..))))...)))))))))).)))))).)).)))))))).))))))))))))))))
)))))))).


SIMILARITIES
miRBase osa-MIR809d: 3e-24

PMRD osa-miR809d: 3e-24

microPC miR809: 0.00001		UniProt no hits

RFAM MIR1122: 6e-23		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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