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ABOUT THIS RECORD

ID: MNEST004624
species: Oryza sativa
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTATTTTGGGACGGAGGGAGT

miRNA*
TCCATCCGTCCCAGAATATAA

mismatches: 1
bulges: 0

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pre-miRNA
TAGCCAACAAGTTGTTTAACTACTCCATCCGTCCCAGAATATAAGAAGTTTTAAAGTTGGACACGGTTATTAAAAAAATTGGTAGAAGTAAATGGTAGAG
GGTTGTGATTAGATGAGTAGTGGAGGTAGGTAGAAAAAGTGAATGGTGGAGAGTTGTGATTGGTTGGGAAGAAAATGTTGATCGAGAAGTTGTTATATTT
TGTGACAAATCCTTTAGGCTAATAATTGTTGTATTTTGGGACGGAGGGAGTAAATAATAGCCAACGGTACT


dot-bracket secondary structure
..(((.....((((((....((((((.(((((((((((((((((((..(((((..(((....((..(((((((.....)))))))..)).)))..)))))
..))..(((((....(((..((((((...((..((((.((((........((....((((...((.....))....)))).)).........)))).)))
)...))....)))))).)))..))))).))))))))))))))))).))))))...))))))....)))...



SIMILARITIES
miRBase osa-MIR1442: 0.00001

PMRD osa-miRf11705-akr: 0.0000009

microPC miR1439: 0.0002
UniProt no hits

RFAM MIR1122: 0.000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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