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ABOUT THIS RECORD
ID:
MNEST004630
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCCGTCCCTAAATATAAGAG
miRNA*
CTTATATTTTGGGACGGAGGG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GTTAAATGCTCC
CTCCGTCCCTAAATATAAGAG
ATTTTGGTTGGATGTGACGTATTCTAGTACTGTGAATCTAGATAGGAGCATGTCCAAATTCGTAGTA
TTAGGATACATCCCATTTACCCAAAATCC
CTTATATTTTGGGACGGAGGG
AGTAGATGT
dot-bracket secondary structure
......((((((
(((((((((.(((((((((.(
(((((((.((((((.((.(((((((((((((((((((...((((......))))...))))))))))
))))))))).)).)))))).)))))))).
))))))))).)))))))))))
)))).....
SIMILARITIES
miRBase
osa-MIR818d
:
0.000000008
PMRD
osa-miRf10497-akr
:
0.000000000000002
microPC
miR818
:
7e-71
UniProt
no hits
RFAM
MIR1122: 6e-84
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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