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ABOUT THIS RECORD

ID: MNEST004636
species: Oryza sativa
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAAGGGGCATGCAGAGGAG

miRNA*
 CCTGTGCTTGCCTCTTCCATT

mismatches: 2
bulges: 0
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pre-miRNA
 TTTGGCTGTAGCAGCAGCAGTGGAAGGGGCATGCAGAGGAGCAGGAGATTCAGTTTGAAGCTGGACTTCACTTTTGCCTCTCTCTCCTGTGCTTGCCTCT
TCCATTCCTGCTGCTAGGCTGTT

dot-bracket secondary structure
...((((.(((((((((.(((((((((((((.(((.(((((..(((((..(((..(((((.....)))))...)))..)))))))))).))).)))))))
)))))).)))))))))))))...


SIMILARITIES
miRBase osa-MIR528: 1e-44

PMRD osa-miR528: 1e-44

microPC miR528: 2e-42		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: osa-miR528 from PMRD (MNEST049018)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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