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ABOUT THIS RECORD

ID: MNEST004659
species: Oryza sativa
miRNA family: MIRf1229
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGAGAGTGAGCACACACGGTG

miRNA*
 CTGTGCGTGCTCACTCTCTAT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TGGGAGNTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCNATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCC
GTT

dot-bracket secondary structure
((((....(((((((((((((((((((((.((((((....(((((((((((....))..))))))))))))))).))))))))))))).)))))))))))
)..


SIMILARITIES
miRBase osa-MIR156b: 1e-43

PMRD osa-miR156b: 1e-43

microPC miR156: 2e-39		UniProt no hits

RFAM mir-156: 2e-39		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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