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ABOUT THIS RECORD

ID: MNEST004670
species: Oryza sativa
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCATCATCATCATCATCTTAA

miRNA*
GGTATGAGAGTGGAGAGGCCT

mismatches: 5
bulges: 0

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pre-miRNA
CTCATCACCCTCCAAATTCTAATCCCCTGCAGCATCATCATCATCATCTTAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTT
GGTATGAGAGTGGAGAGGCCT
AATTAAGGGGGTTTGTAGGATAATGTTA


dot-bracket secondary structure
...............(((((((((((((...((.((.((((..((((.(((((...(((((..((((((.......)))))).))))).........)))
)).))))..)))).)).))..
.....)))))))...)))))).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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