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ABOUT THIS RECORD

ID: MNEST004680
species: Oryza sativa
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGATCAGGCTTCATTCCTC

miRNA*
 GGAATGCAGTTTGATCCAAGA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TGATTGAGAGAGATAGGTGTTNGGAATGCAGTTTGATCCAAGATCTGCCTATATATATGGTGTGTATATCATATCTTGTGATATGGGGGATATGCAACAA
GTGTGTGACAGGGGTGGGTAGATCTCGGATCAGGCTTCATTCCTCACACCAATACTCTCTGTTG

dot-bracket secondary structure
......((((((((.(((((..((((((.((((((((((.((((((((((((((((.((.(((((((.(((((((....)))))))...))))))).)).
)))))).((....)))))))))))).)))))))))).))))))..))))).)).))))))....


SIMILARITIES
miRBase osa-MIR166i: 5e-72

PMRD osa-miR166i: 5e-72

microPC miR166: 0.00003		UniProt no hits

RFAM mir-166: 8e-65		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets
Source sequences
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