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ABOUT THIS RECORD
ID:
MNEST004686
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCTCTGTCCCAAAATAAAC
miRNA*
TTATTTTGGAACAGAGTGAGT
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATGTGACATAC
TCCCTCTGTCCCAAAATAAAC
CCGATGTGACACATACTAGTACTTGTGTCCAAGATGTATTAGGATGTGGCACATCCGTACAATGTTGG
T
TTATTTTGGAACAGAGTGAGT
ATATGTTA
dot-bracket secondary structure
....(((((((
((.((((((.(((((((((((
(.((((((.(((((.(((((((((........)).))))))).))))).))))))...........))
)
))))))))).)))))).))))
)..)))).
SIMILARITIES
miRBase
osa-MIR1862d
:
0.000002
PMRD
osa-miRf11090-akr
:
0.000002
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 2e-64
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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