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ABOUT THIS RECORD
ID:
MNEST004687
species:
Oryza sativa
miRNA family:
MIRf528
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTACTAGTATGTGTCACATCG
miRNA*
ATGTGCCACATCCTAATACAT
mismatches:
4
bulges:
0
View larger
pre-miRNA
ACTCTGTTCCAAAATAAACCAACATTGTACGG
ATGTGCCACATCCTAATACAT
CTTGGACACAA
GTACTAGTATGTGTCACATCG
GGTTTATTTTGGGAC
AGAGGGAGTATGTC
dot-bracket secondary structure
.(((((((((((((((((((.((...))...(
(((((.(((((.(((.(((..
.(((....)))
))).))).))))).)))))).
)))))))))))))))
))))..........
SIMILARITIES
miRBase
osa-MIR1862d
:
0.000001
PMRD
osa-miRf11090-akr
:
0.000001
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 5e-59
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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