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ABOUT THIS RECORD

ID: MNEST004694
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATATAAGTCATTCTAGCATTT

miRNA*
 ATGCTAGAATGACTTACATTA

mismatches: 1
bulges: 0
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pre-miRNA
 ATGCACATATAGCTACTTCCTCCGTTTCACAATATAAGTCATTCTAGCATTTTCCACATTTATATTTAGATTCATTAATATCAATATGAATATGAGAAAT
GCTAGAATGACTTACATTATGAAACGGAGGGAGTAGCTAACAGCCCG

dot-bracket secondary structure
.........((((((((((((((((((((.(((.(((((((((((((((((((.((.(((((((((..(((........)))))))))))).)).)))))
)))))))))))))).))).))))))))))))))))))))........


SIMILARITIES
miRBase osa-MIR809d: 9e-24

PMRD osa-miR809d: 9e-24

microPC miR1132: 0.0000000000005		UniProt no hits

RFAM MIR1122: 2e-68		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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