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ABOUT THIS RECORD
ID:
MNEST004697
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTAAGTCATTATAGCATTT
miRNA*
ATGCTAGAATGACTTACATTG
mismatches:
1
bulges:
0
View larger
pre-miRNA
TACTACTCCTTCCNTTTCACC
ATGTAAGTCATTATAGCATTT
TCCACATTTATATTGATTCATTAACATCAATATGAATGTGGGAA
ATGCTAGAATGACT
TACATTG
TAAGACGAAGTAAGTACT
dot-bracket secondary structure
...((((.((((..(((.((.
((((((((((((.((((((((
(((((((((((((((((........)))))))))))))))))))
)))))).)))))))
))))).)
).))).))))..))))..
SIMILARITIES
miRBase
osa-MIR809d
:
3e-23
PMRD
osa-miR809d
:
3e-23
microPC
miR809
:
0.0000000000001
UniProt
no hits
RFAM
MIR1122: 1e-35
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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