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ABOUT THIS RECORD

ID: MNEST004700
species: Oryza sativa
miRNA family: MIR446
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATCAATATGAATGTGGGAAA

miRNA*
 TTCCACATGTCTAGATTCATTAA

mismatches: 4
bulges: 2
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pre-miRNA
 ATTATAAGTATGTACTACTCTCTCCGTTCACAATGTAAGTCATTTTAGCATTTTCCACATGTCTAGATTCATTAACATCAATATGAATGTGGGAAATGCT
AGAATGACTTACATTGTGAAACAGAGGAAGTAGTACCTACTACAA

dot-bracket secondary structure
......((((.((((((((.((((..((((((((((((((((((((((((((((((((((.((...(((.((....)).)))..))))))))))))))))
))))))))))))))))))))...)))).)))))))).))))....


SIMILARITIES
miRBase osa-MIR809d: 2e-31

PMRD osa-miR809d: 2e-31

microPC miR809: 0.000000000000008		UniProt no hits

RFAM MIR1122: 5e-35		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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