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ABOUT THIS RECORD

ID: MNEST004702
species: Oryza sativa
miRNA family: MIR446
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATCAATATGAATATAGGAAA

miRNA*
 TCTCACATTCATATTGATGTT

mismatches: 3
bulges: 0
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pre-miRNA
 AATCAACAGGCTTGTACTCCCTCTGTTTCACAATGTAAGTCATTTTAGCATTTCTCACATTCATATTGATGTTAATGAATCTAGATATATTATTCTCACA
TTCATATGTCTAGATTCATTAACATCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTAAAACAGAGGAAGTATGTTATATGTGTA

dot-bracket secondary structure
.....(((....((((((.(((((((((.((((((((((((((((((((((((((...((((((((((((((((((((((((((((((((..........
...))))))))))))))))))))))))))))))))...)))))))))))))))))))))))))).))))))))).)))))).....)))...


SIMILARITIES
miRBase osa-MIR809d: 4e-39

PMRD osa-miR809d: 4e-39

microPC miR809: 0.00000000000004		UniProt sp|Q6K1U0|P2C17_ORYSJ: 0.0007

RFAM MIR1122: 2e-38		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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