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ABOUT THIS RECORD

ID: MNEST004706
species: Oryza sativa
miRNA family: MIR809
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAATGTGGGAAATGTTAGAA

miRNA*
 CTAGCATTTTTCGCATTCATA

mismatches: 0
bulges: 0
View larger
pre-miRNA
 TTAATAGTGTACTACTCCCTCCATTTCACAATATAAGTTATTCTAGCATTTTTCGCATTCATATTGATGTTAATAAATCTAGATAGATATATATGTTTAG
ATTCATTAACATCAATATGAATGTGGGAAATGTTAGAATGATTTACATTTGTGAAACGGAGGAAGTATATGTTTATA

dot-bracket secondary structure
.(((..(((((((....(((((.((((((((..(((((((((((((((((((((((((((((((((((((((((.((((((((((........)))))))
))).)))))))))))))))))))))))))))))))))))))))))...)))))))).))))).)))))))..)))..


SIMILARITIES
miRBase osa-MIR808: 6e-50

PMRD osa-miR808: 6e-50

microPC miR809: 9e-43		UniProt no hits

RFAM MIR1122: 3e-52		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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