miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST004711
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCCTAAATA

miRNA*
 TTTAGGGATGGAGGGAGTATG

mismatches: 0
bulges: 0
View larger
pre-miRNA
 AAAAAATATTATACTCCCTCCGTCCCTAAATATTTGACGCCGTTGACTTTTTTAAACATGTTTGACCGTTCATCTTATTGAAAACTTTTGTGAAACATAT
AAAACTATATGTATACATAAAAGTATATTTAACAATGAATCAAATGATAGGAAAAGAATTAATAATTACTTAAAATTTTTAATAAGACGAACGGTCAAAT
ATATTTAAAAAAGTCAACGGCATACATATTTAGGGATGGAGGGAGTATGATTAAAAC

dot-bracket secondary structure
.......((((((((((((((((((((((((((.((..((((((((((((((((((.((((((((((((((.(((((((((..(((((((((..((((((
(....)))))))...)))))))))..(((((....))))).((((..((((.((...........)).))))..))))))))))))).))))))))))))
)).)))))))))))))))))).)).))))))))))))))))))))))))))......


SIMILARITIES
miRBase osa-MIR806h: 3e-56

PMRD oru-miR806: 6e-82

microPC miR806: 3e-43		UniProt no hits

RFAM MIR806: 4e-77		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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