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ABOUT THIS RECORD
ID:
MNEST004736
species:
Oryza sativa
miRNA family:
MIRf73
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTCTTCAAGGACCGTAAAAT
miRNA*
TTTACAGTGCTTGAGGAGGTT
mismatches:
2
bulges:
0
View larger
pre-miRNA
CCTTCTATTAAAAAGAGCAAT
TTTACAGTGCTTGAGGAGGTT
CCATGAGTTACCAAAAATTTAATGTAAAATTTGGTACCTCATATTACCTAGGTAACAA
ATTTACAATAGAAAAAGTAAAACCTCATGTAA
TCTCTTCAAGGACCGTAAAAT
TACTCTCTATTACAAAAG
dot-bracket secondary structure
.............((((.(((
(((((.((.((((((((((((
.((((((((((......((((.((((((.((((.(((((..........))))).)))
))))))).))))....))))...)))))).))
)))))))))).)).)))))))
).))))............
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10309-akr
:
2e-28
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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