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ABOUT THIS RECORD

ID: MNEST004767
species: Oryza sativa
miRNA family: MIR390
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCTCAGGAGGGATAGCGCC

miRNA*
 CGCTATCTATCCTGAGCTCCA

mismatches: 2
bulges: 0
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pre-miRNA
 AAGGGTATGGAACAATCCTTGAAGCTCAGGAGGGATAGCGCCTCGAAATCAAACTAGGCGCTATCTATCCTGAGCTCCATGGTTTGTTCTTACCACA

dot-bracket secondary structure
...((((.(((((((.((.((.(((((((((.(((((((((((............))))))))))).))))))))).)).)).)))))))))))...


SIMILARITIES
miRBase osa-MIR390: 1e-46

PMRD osa-miR390: 1e-46

microPC miR390: 4e-25		UniProt no hits

RFAM MIR390: 3e-41		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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