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ABOUT THIS RECORD

ID: MNEST004905
species: Oryza sativa
miRNA family: MIR1127
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTTACTCCCTCCGTTCCATA

miRNA*
 TGGGACGGAGGGAGTATCT

mismatches: 1
bulges: 2
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pre-miRNA
 GTGAGACTTACTCCCTCCGTTCCATAAAAAACCAACCTAGTACTGGATGTGACACATCCTATTACAACGAATCTGGACATACATCTGTCCAGATTTGTTA
TACTAGAATATGTCACATCCAGTCCTAGATTCACTTTTTTTGGGACGGAGGGAGTATCTTT

dot-bracket secondary structure
..((((..((((((((((((((((.(((((...((.((((.(((((((((((((.((.(((.((.((((((((((((((......)))))))))))))).
)).))).)).))))))))))))).)))).))...))))).)))))))))))))))))))).


SIMILARITIES
miRBase osa-MIR1442: 0.000000000000009

PMRD osa-miRf11738-akr: 9e-18

microPC miR816: 0.0000000001		UniProt no hits

RFAM MIR1122: 1e-45		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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