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ABOUT THIS RECORD
ID:
MNEST004907
species:
Oryza sativa
miRNA family:
MIRf528
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGATTCGTTGTACTAGAATGT
miRNA*
ATGCTAGTACTACAAATCCGG
mismatches:
4
bulges:
0
View larger
pre-miRNA
CTGGATATGACAC
ATGCTAGTACTACAAATCCGG
ACATATATCTGTCC
AGATTCGTTGTACTAGAATGT
GTCCATAACT
dot-bracket secondary structure
..((.((((((((
((.(((((((.((.((((.((
(((......)))))
.)))).)).))))))).))))
)).)))).))
SIMILARITIES
miRBase
osa-MIR1862g
:
0.00006
PMRD
osa-miRf11780-akr
:
0.000000004
microPC
miR816
:
0.00000000006
UniProt
no hits
RFAM
MIR1122: 8e-20
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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