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ABOUT THIS RECORD

ID: MNEST004915
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATGTGGGAAATGCTAGAATG

miRNA*
 TTCTAGCATTTTCCACATTCA

mismatches: 0
bulges: 0
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pre-miRNA
 TTACAGATATTGACATATACTCCTTCCATTTCACAATGTAAGTTATTCTAGCATTTTCCACATTCATATTGATGTATTAATATGAATGTGGGAAATGCTA
GAATGACTTGCATTGTAAAACGGAGGAAGTACATGTCAGTGTATTCT

dot-bracket secondary structure
......((((((((((.((((.(((((.(((.((((((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))
)))))))))))))))).))).))))).)))).)))))))))).....


SIMILARITIES
miRBase osa-MIR808: 8e-18

PMRD osa-miRf11050-akr: 5e-19

microPC miR809: 0.00000003		UniProt no hits

RFAM MIR1122: 7e-31		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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