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ABOUT THIS RECORD

ID: MNEST004921
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTCTTATAACCTGAAACGGAG

miRNA*
 CTGTTTCATATTATAAGATTT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 ACGATATATCCTCTGTTTCATATTATAAGATTTTCTAGCATTATCCACGTTCTCATATATATATATATATATATATATATATATATATATATGAATGAAT
GAATGTGGTTAATATGTTAGAAAGTCTTATAACCTGAAACGGAGGGAGCAGTA

dot-bracket secondary structure
........((((((((((((..(((((((((((((((((((...((((((((((((.((((((((((((((((....)))))))))))))))).))))..
)))))))).....)))))))))))))))))))..)))))))))))).......


SIMILARITIES
miRBase osa-MIR819i: 0.0000000005

PMRD osa-miR819i: 0.0000000005

microPC miR819: 0.00003		UniProt no hits

RFAM MIR1122: 0.0000000006		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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