ABOUT THIS RECORDspecies: Mus musculus
miRNA family: let-7
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGGTTGTATGGTT miRNA* CTATACAATCTACTGTCTTTCC mismatches: 1 bulges: 0 |
pre-miRNA
CACTGACTGACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTTTTGGGCTCTGCCCCGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC
CGCAATATC
dot-bracket secondary structure
)......((.((((((((.(((.(((((((((((((((((((((..((((...))))(((...)))..))))))))))))))))))))).))).))).)))
)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
deep sequencing data evidence
CACTGACTGACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTTTTGGGCTCTGCCCCGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC
CGCAATATC
dot-bracket secondary structure
)......((.((((((((.(((.(((((((((((((((((((((..((((...))))(((...)))..))))))))))))))))))))).))).))).)))
)))).....
SIMILARITIES| miRBase mmu-let-7c-2: 6.0E-49 PMRD no hits microPC no hits | UniProt no hits RFAM 7let-7: 8.0E-24 | most similar mature miRNAs |
Identical with: mmu-let-7c-2 from miRBase (MNEST031756), rno-let-7c-2 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
deep sequencing data evidence
