ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-2840
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGGAACTGGAAGGAGAGGAG miRNA* CCACTCTTTCCATTTATCTA mismatches: 4 bulges: 1 |
pre-miRNA
GTAGAGATGTAGAGGAACTGGAAGGAGAGGAGGGAAGAGCAATGGTAATCAGGATATATTGTATGAGAAAAGTCTATTTTCAATAAAGGGGTGAAATGGA
AACAAGAAGTATCCCTTAAGTCCACTCTTTCCATTTATCTATTTCTCAC
dot-bracket secondary structure
...((((.(((((..((.(((((((((.(((..(((((((((((............))))))...(((....))).)))))....((((((((...((..
..)).....))))))))...))).))))))))).)).))))).))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GTAGAGATGTAGAGGAACTGGAAGGAGAGGAGGGAAGAGCAATGGTAATCAGGATATATTGTATGAGAAAAGTCTATTTTCAATAAAGGGGTGAAATGGA
AACAAGAAGTATCCCTTAAGTCCACTCTTTCCATTTATCTATTTCTCAC
dot-bracket secondary structure
...((((.(((((..((.(((((((((.(((..(((((((((((............))))))...(((....))).)))))....((((((((...((..
..)).....))))))))...))).))))))))).)).))))).))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
