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ABOUT THIS RECORD
ID:
MNEST004968
species:
Mus musculus
miRNA family:
miR-2840
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAGGAGCTGGAAGAAGAGGAG
miRNA*
CCTTTGACCTCTCGCTCTTCGT
mismatches:
5
bulges:
1
View larger
pre-miRNA
GCCGAGGCAGAGAAAGCCGAG
GAGGAGCTGGAAGAAGAGGAG
GACGAGGAGCTAGACGAGACCCTGTCGGAGAGACTCGGGGGTCTGACGGAGATGTTTC
CGAGAGGGTCCGGTCAGCCGCCGGAGCCA
CCTTTGACCTCTCGCTCTTCGT
GGCTCAGAAGATGTACAG
dot-bracket secondary structure
((....))......(((((..
(((((((.(((...(((((.(
(....((.(((.(((..((((((.(((((.(((((....)))))((((....))))))
))).))))))..))))))..))....)).
)))))....))).))))))).)
))))..............
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q75Q41|TOM22_RAT: 0.0000002
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record