ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-3533
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAAGTGTGATGTGGATAT miRNA* ATCCATCGAGACACTTTTCAC mismatches: 5 bulges: 1 |
pre-miRNA
GGCATGGAGGTCTGTGGTATCCATCGAGACACTTTTCACTCCATCATGAAGTGTGATGTGGATATCCGCAAGACCTGTAT
dot-bracket secondary structure
...(((.((((((((((((((((.((..(((((((............)))))))..)))))))).)))).)))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGCATGGAGGTCTGTGGTATCCATCGAGACACTTTTCACTCCATCATGAAGTGTGATGTGGATATCCGCAAGACCTGTAT
dot-bracket secondary structure
...(((.((((((((((((((((.((..(((((((............)))))))..)))))))).)))).)))))).)))
SIMILARITIES| miRBase gga-mir-3533: 0.00000000006 PMRD no hits microPC no hits | UniProt sp|P41339|ACTA_LIMPO: 0.00003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
