ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-2208
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGCAGATTATGGTACACTGC miRNA* GGTTGTGCTAACAATCTGCTGGT mismatches: 3 bulges: 2 |
pre-miRNA
GTTTGTTTTACATGCAGATTATGGTACACTGCTTGTGCGAGCGATGAAGGAGAAGTCATTGTTTTTGGTGGTTGTGCTAACAATCTGCTGGTTCATCACA
dot-bracket secondary structure
((.((....((..(((((((.((((((((((((.....(((((((((........)))))))))..))))).)))))))..)))))))..)).))..)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTTTGTTTTACATGCAGATTATGGTACACTGCTTGTGCGAGCGATGAAGGAGAAGTCATTGTTTTTGGTGGTTGTGCTAACAATCTGCTGGTTCATCACA
dot-bracket secondary structure
((.((....((..(((((((.((((((((((((.....(((((((((........)))))))))..))))).)))))))..)))))))..)).))..)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q3KRE6|KLDC2_RAT: 0.0000000004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
