ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-3113
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACCTGGTCCTGGTCCTGGTCC miRNA* CATAGGACCAGGTCCAGGAAG mismatches: 5 bulges: 0 |
pre-miRNA
CCTTGGGTTGGCCATAGGACCAGGTCCAGGAAGCCCTCCTAATCTGGGGTTAGACATAGGCCCTGGGCCTGGAAGAGCCCCTGTTCTAGGGTTTAAACCT
GGTCCTGGTCCTGGTCCCAACAGGCC
dot-bracket secondary structure
......(((((...((((((((((.((((((((((((...(((..((((((.....((((((...))))))....)))))).)))..)))))))...)))
)).))))))))))...))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCTTGGGTTGGCCATAGGACCAGGTCCAGGAAGCCCTCCTAATCTGGGGTTAGACATAGGCCCTGGGCCTGGAAGAGCCCCTGTTCTAGGGTTTAAACCT
GGTCCTGGTCCTGGTCCCAACAGGCC
dot-bracket secondary structure
......(((((...((((((((((.((((((((((((...(((..((((((.....((((((...))))))....)))))).)))..)))))))...)))
)).))))))))))...))))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P0CG14|CTF8A_MOUSE: 0.0004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
