ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-147
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAAACATTTCTGCACTAAA miRNA* CCAGTGTACGGAAGTGCTTTTGCT mismatches: 3 bulges: 2 |
pre-miRNA
AAGAACATTATATGAATTTAGTGGAAACATTTCTGCACTAAATAGATGTTGATGCCAGTGTACGGAAGTGCTTTTGCTACATTTGTAGGGTTTGCC
dot-bracket secondary structure
..((((....(((((((.((((((((.((((((((((((..((........))...)))))..))))))).)))))))).)))))))..))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGAACATTATATGAATTTAGTGGAAACATTTCTGCACTAAATAGATGTTGATGCCAGTGTACGGAAGTGCTTTTGCTACATTTGTAGGGTTTGCC
dot-bracket secondary structure
..((((....(((((((.((((((((.((((((((((((..((........))...)))))..))))))).)))))))).)))))))..))))...
SIMILARITIES| miRBase mmu-mir-147: 4e-25 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 0.00000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
