ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-1550
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATGAGGGTGTAGTGCAGTG miRNA* CTGGGCACACCCTAATCAGG mismatches: 2 bulges: 1 |
pre-miRNA
CTAGTCAAGCCGCTGGGCACACCCTAATCAGGAATCCTGCCAGCCATGAGGCGAGGACAAGAAGGGTGCAGACTTTCTGATTCATGATGAGGGTGTAGTG
CAGTGGCTTGCAGA
dot-bracket secondary structure
...(.((((((((((.(((((((((.((((.(((((.((((.(((....)))..)).))((((((.......))))))))))).)))).))))))).)).
)))))))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTAGTCAAGCCGCTGGGCACACCCTAATCAGGAATCCTGCCAGCCATGAGGCGAGGACAAGAAGGGTGCAGACTTTCTGATTCATGATGAGGGTGTAGTG
CAGTGGCTTGCAGA
dot-bracket secondary structure
...(.((((((((((.(((((((((.((((.(((((.((((.(((....)))..)).))((((((.......))))))))))).)))).))))))).)).
)))))))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|A6NL08|O6C75_HUMAN: 0.0000001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
