ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-1814
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGATTGTTTGGTTTTGTTTTT miRNA* GTACAACCCATACACTTAGT mismatches: 5 bulges: 1 |
pre-miRNA
TAAGTACAACCCATACACTTAGTTACCAGCACAAGCCGGTGAATCCCTTTCTGGACTGAGCTTTTGGTTTTTGAACTGGAACTTTTGCAGCTATTACAAG
TTTAGAACCTTAAGTGGGGAGATTTAATGGGCTAATTTTATTAAAGGATTGTTTGGTTTTGTTTTT
dot-bracket secondary structure
.(((.((((.(((.(((.((..(((((.((....)).))))).((((((((((((((.((((...((((((......)))))).....))))......))
)))))))........)))))..(((((((((.....))))))))).)).))).)))..)))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TAAGTACAACCCATACACTTAGTTACCAGCACAAGCCGGTGAATCCCTTTCTGGACTGAGCTTTTGGTTTTTGAACTGGAACTTTTGCAGCTATTACAAG
TTTAGAACCTTAAGTGGGGAGATTTAATGGGCTAATTTTATTAAAGGATTGTTTGGTTTTGTTTTT
dot-bracket secondary structure
.(((.((((.(((.(((.((..(((((.((....)).))))).((((((((((((((.((((...((((((......)))))).....))))......))
)))))))........)))))..(((((((((.....))))))))).)).))).)))..)))).)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_bacteria: 0.0006 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
