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ABOUT THIS RECORD

ID: MNEST005081
species: Mus musculus
miRNA family: mir-1898
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGTCAAGGTTCACAGGGGATC

miRNA*
ATAATCTGTTTACTTTGACCTAA

mismatches: 4
bulges: 1

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pre-miRNA
TGTATGAACATAGGTCAAGGTTCACAGGGGATCAAGAAATATTATTCTTGTATAATCTGTTTACTTTGACCTAAATACTAGC

dot-bracket secondary structure
.((((.....(((((((((((..(((((..((((((((......)))))).))..)))))..))))))))))).))))....


SIMILARITIES
miRBase mmu-mir-1898: 9e-41

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: eca-mir-1898 from miRBase (MNEST027312)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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