ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-671
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGAAGCCCTGGAGGGGCTGG miRNA* GGTTCTCAGGGCTCCACCT mismatches: 3 bulges: 2 |
pre-miRNA
GAACTGGCAGGCCAGGAAGAGGAGAAGCCCTGGAGGGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGTAGAGCC
dot-bracket secondary structure
.....(((.(((..((((((((...(((((((..(((((((((((.(((....)))..))))))))))))))))))...))))))))..))).....)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAACTGGCAGGCCAGGAAGAGGAGAAGCCCTGGAGGGGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTCTTTCGAGCCGTAGAGCC
dot-bracket secondary structure
.....(((.(((..((((((((...(((((((..(((((((((((.(((....)))..))))))))))))))))))...))))))))..))).....)))
SIMILARITIES| miRBase mml-mir-671: 2e-45 PMRD no hits microPC no hits | UniProt sp|Q9P2E5|CHPF2_HUMAN: 0.0000004 RFAM mir-671: 2e-27 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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