ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-101
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACAGTACTGTGATAACTGA miRNA* AGTTATCACAGTGCTGATGCT mismatches: 0 bulges: 1 |
pre-miRNA
CGACTGACAGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCATCTTGC
dot-bracket secondary structure
)........(((((((((...((((((((((((((((((.((((............)))))))))))))))))))))).))..))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGACTGACAGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCATCTTGC
dot-bracket secondary structure
)........(((((((((...((((((((((((((((((.((((............)))))))))))))))))))))).))..))))))).......
SIMILARITIES| miRBase mmu-mir-101a: 7.0E-42 PMRD no hits microPC no hits | UniProt no hits RFAM 1mir-101: 1.0E-28 | most similar mature miRNAs |
Identical with: sla-mir-101 from miRBase (MNEST027611), mmu-mir-101a from miRBase , ppy-mir-101-1 from miRBase , mml-mir-101-1 from miRBase , ptr-mir-101-1 from miRBase , ssc-mir-101-2 from miRBase , cfa-mir-101-1 from miRBase , mne-mir-101 from miRBase , rno-mir-101a from miRBase , lla-mir-101 from miRBase , oan-mir-101-1 from miRBase , ggo-mir-101 from miRBase , ppa-mir-101 from miRBase , bta-mir-101-1 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
