ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-145
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGATTCCTGGAAATACTGTTC miRNA* TCCAGTTTTCCCAGGAATCCCT mismatches: 3 bulges: 1 |
pre-miRNA
CTCTCCCACCTTGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTGGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGCTTAGCA
dot-bracket secondary structure
........((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).)))).)).))))).)).)).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CTCTCCCACCTTGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTGGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGCTTAGCA
dot-bracket secondary structure
........((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).)))).)).))))).)).)).......
SIMILARITIES| miRBase rno-mir-145: 8e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-145: 8e-36 | most similar mature miRNAs |
Identical with: mmu-mir-145 from miRBase (MNEST031878) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
