ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-24
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCTCAGTTCAGCAGGAACA miRNA* TGCCTACTGAGCTGATATCAGG mismatches: 4 bulges: 1 |
pre-miRNA
ACTGCCCAGCTGTGAGGGGACCCGTTCTCCGGTGCCTACTGAGCTGATATCAGGTGATTATTTGAGACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGC
CCTTGAGCAAAAAGCCTA
dot-bracket secondary structure
).......(((...(((((...((..((((.((.(((.(((((((((..((((((..((....)).)).)))).))))))))).))).)).)))).))..)
)))).)))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTGCCCAGCTGTGAGGGGACCCGTTCTCCGGTGCCTACTGAGCTGATATCAGGTGATTATTTGAGACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGC
CCTTGAGCAAAAAGCCTA
dot-bracket secondary structure
).......(((...(((((...((..((((.((.(((.(((((((((..((((((..((....)).)).)))).))))))))).))).)).)))).))..)
)))).)))..........
SIMILARITIES| miRBase rno-mir-3074: 1.0E-34 PMRD no hits microPC no hits | UniProt no hits RFAM 4mir-24: 5.0E-13 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
