ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-147
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGC miRNA* GGAAACATTTCTGCACAAAA mismatches: 4 bulges: 0 |
pre-miRNA
TATTATTAAACAAGGAAACATTTCTGCACAAAATAGATGTTGTTGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTA
dot-bracket secondary structure
.............((((.((((((((((((.((((.....)))).....)))))))))))).))))..(((....)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TATTATTAAACAAGGAAACATTTCTGCACAAAATAGATGTTGTTGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTA
dot-bracket secondary structure
.............((((.((((((((((((.((((.....)))).....)))))))))))).))))..(((....)))
SIMILARITIES| miRBase mmu-mir-147: 2e-26 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 0.0000000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
