ABOUT THIS RECORD

ID: MNEST005143
species: Mus musculus
miRNA family: mir-199
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CAGGAGATCCTGCTCCGTCGCCCCAGTGTTCAGACTACCTGTTCAGGACAATGCCGTTGTACAGTAGTCTGCACATTGGTTAGACTGGGCAAGGGCCAGC


dot-bracket secondary structure
..((...((.(((((.(((...(((((((.((((((((.(((.(.((......))...).))))))))))).)))))))...))).))))).)).))...



SIMILARITIES

miRBase mmu-mir-199a-2: 5e-52 PMRD no hits microPC no hits

UniProt no hits RFAM mir-199: 3e-44

most similar mature miRNAs

Identical with: cfa-mir-199-2 from miRBase (MNEST026757)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence