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ABOUT THIS RECORD

ID: MNEST005147
species: Mus musculus
miRNA family: miR-1648
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGCTCGGCTCGGCTCGGCTC

miRNA*
GCGGGCGCAGCGGGCCTC

mismatches: 3
bulges: 2

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pre-miRNA
CTTTCATTTGTAGGCTCGGCTCGGCTCGGCTCCGGACTCCACTGCAGCAGATTCGCCTCACTCGCCTGGCTCCGCCCTAGCCGGGCTCACGGCGGGTGGC
GGCGTGCGTGGCAGTCGGCCGTGGCGGGCGCAGCGGGCCTC


dot-bracket secondary structure
...........(((((((.((..(((((.((.(((.((..(((((.(((....(((((((((((((.(((((.((....)).)))))...))))))))).
)))))))...))))).))))).)))))))..))))))))).



SIMILARITIES
miRBase tgu-mir-2974: 0.0004

PMRD osa-miRf10502-akr: 0.0004

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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