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ABOUT THIS RECORD
ID:
MNEST005195
species:
Mus musculus
miRNA family:
mir-140
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTGGTTTTACCCTATGGTAG
miRNA*
ACCACAGGGTAGAACCACGG
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGGCCTCCCGTCCTTCTGTGTCTCTCTCTTGTGTTCCTGCC
GGTGGTTTTACCCTATGGTAG
GTTACGTCATGCTGTTCT
ACCACAGGGTAGAACCACGG
ACAGGATACTGGAGCACCCTCTGCATCGAAGGACTCCA
dot-bracket secondary structure
.........(((((((.((((....((((.((((.((((((
(.((((((((((((.((((((
(..(((......))))))
)))).)))))))))))))))
.)))))))).))))........)))).)))))))....
SIMILARITIES
miRBase
rno-mir-140
:
4e-38
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-140: 1e-29
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record