miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST005227
species:
Sus scrofa
miRNA family:
miR-2305
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGGGGTGGCGGGGTTGGGGC
miRNA*
TCCGGCTCCGGCACCATGTC
mismatches:
2
bulges:
1
View larger
pre-miRNA
GGCGGCTCCGGC
TCCGGCTCCGGCACCATGTC
CCTGCAGTACGGGGCAGAGGAGACGCCCCTCGCCGGCAGTTACGGCGCGGCGGACTCGTTCCCAAAGG
ACTTCGGCTACGGCGTGGAGGAGGAGGAAGAGGAGGCTGCAGC
CGGGGGTGGCGGGGTTGGGGC
GGGGGCCGG
dot-bracket secondary structure
..(((((((.((
((((((((((.((((.((..
.(((((((..(((((.........)))))((((((((.......)).)))))).(((.((((......
.(((((((....)).))))).....)))))))...))))))).
))..)))).))))))))))))
.))))))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q99K70|RRAGC_MOUSE: 0.000000001
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record