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ABOUT THIS RECORD
ID:
MNEST005230
species:
Sus scrofa
miRNA family:
miR-4198
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATGATGTTATTTTAGAGGTG
miRNA*
CTGGAGGTGATATCTGTCA
mismatches:
4
bulges:
2
View larger
pre-miRNA
GAGTCTAGTGCCAAAGGAGAAATATGACAAA
AATGATGTTATTTTAGAGGTG
ACATCTGGAAGAACTA
CTGGAGGTGATATCTGTCA
ACAGTTTACCCGG
GAAATATTTGATATG
dot-bracket secondary structure
..(((.((((((...((..((((.(((((..
...(((((((((((...((((
...(((...)))..))
)).))))))))))))))))
...))))..)).)
)...)))).)))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|O75570|RF1M_HUMAN: 0.000000000000005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record