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ABOUT THIS RECORD
ID:
MNEST005239
species:
Sus scrofa
miRNA family:
miR-4058
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGGATGCGGGTTTGAGCCCT
miRNA*
GGATCGAACCTGCAACCTCAT
mismatches:
3
bulges:
0
View larger
pre-miRNA
GTTGGGAGTTCCTGTTGTGGCCCAGCGGTAATGAACTGGTGTAGTATCTAT
AAGGATGCGGGTTTGAGCCCT
GGCCACAGCTCATGGCAACACCAGATTC
CAACCCACTGAGCCAGGTCAG
GGATCGAACCTGCAACCTCAT
AGTTCCTGGTTGGATTGTTAACCACTGAACCATGACGGGAACTCCGCA
dot-bracket secondary structure
....((((((((((((((((..(((.((((((((.(((...(((...((((
.(((.(((((((((((.((((
((((...((((((((.............
....))).)))))..))))))
)).))))))))))).))).))
))...)))..))).))))).))).)))..))))))))))))))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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