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ABOUT THIS RECORD
ID:
MNEST005247
species:
Sus scrofa
miRNA family:
miR-1587
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGCTGGGCTGGGCTGGGCTG
miRNA*
GTCCATGTTCCAGCCTGGCCATC
mismatches:
4
bulges:
2
View larger
pre-miRNA
TCT
GTCCATGTTCCAGCCTGGCCATC
TTCAAGCTGCCGGAGATGAGGCTTCT
GGGCTGGGCTGGGCTGGGCTG
dot-bracket secondary structure
...
(((((...((((((((((((...
...(((((..((....)).)))))..
.)))))))))))).)))))..
SIMILARITIES
miRBase
hsa-mir-3620
:
0.0002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-692: 0.00006
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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