ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: mir-544
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATCTGCATTTTTAACAAGAT miRNA* CTTATTAAAATGCAGATTCT mismatches: 2 bulges: 1 |
pre-miRNA
TCACCTGGGGATCTTATTAAAATGCAGATTCTGGCTCAGAAGTTTTGGAGTGGGGTCTGAAAATCTGCATTTTTAACAAGATGCCAGGCTG
dot-bracket secondary structure
...(((((..(((((.(((((((((((((((.(((((...............))))).))..))))))).)))))).))))).)))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCACCTGGGGATCTTATTAAAATGCAGATTCTGGCTCAGAAGTTTTGGAGTGGGGTCTGAAAATCTGCATTTTTAACAAGATGCCAGGCTG
dot-bracket secondary structure
...(((((..(((((.(((((((((((((((.(((((...............))))).))..))))))).)))))).))))).)))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-544: 0.000000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
